Publications

Journal papers

H. Khotanlou and O. Colliot and J. Atif and I. Bloch
3D Brain Tumor Segmentation in MRI Using Fuzzy Classification, Symmetry Analysis and Spatially Constrained Deformable Models
To appear in Fuzzy Sets and Systems

J. Atif, X. Ripoche, and A. Osorio.
Non-rigid medical image registration using generalized mutual information and competitive density estimation.
IEEE Transactions on Medical Imaging, 2006. In press.

Conference papers

Emanuel Aldea, Geoffroy Fouquier, Jamal Atif and Isabelle Bloch
Kernel Fusion for Image Classification Using Fuzzy Structural Information
To appear in the proceedings of the third International Symposium on Visual Computing (ISVC'2007). Lake Tahoe, Nevada/California, USA, Nov. 26-28, 2007

Emanuel Aldea, Geoffroy Fouquier, Jamal Atif and Isabelle Bloch
Classification d'images par fusion d'attributs flous de graphes, relations spatiales et noyaux marginalis~s
Image classification using fusion of fuzzy graph attributes, spatial relations and marginalized kernels
A paraitre dans les actes des rencontres Francophones sur la Logique Floue et ses Applications (LFA 2007)

O. Nempont and J. Atif and E. Angelini and I. Bloch
Combining Radiometric and Spatial Structural Information in a New Metric for Minimal Surface Segmentation
Information Processing in Medical Imaging (IPMI 2007), LNCS 4584, pages 283-295, Kerkrade, The Netherlands, Jul 2007

E. Aldea and J. Atif and I. Bloch Image Classification using Marginalized Kernels for Graphs
In the proceedings of the 6th IAPR TC-15 Workshop on Graph-based Representations in Pattern Recognition (GBR'2007 Springer), LNCS 4538, pages 103--113, ISBN: 978-3-540-72902-0. Alicante, Spain, June 2007

Geoffroy Fouquier, Jamal Atif and Isabelle Bloch
Local reasoning in fuzzy attribute graphs for optimizing sequential segmentation
In the proceedings of the 6th IAPR TC-15 Workshop on Graph-based Representations in Pattern Recognition (GBR'2007 Springer), LNCS 4538, pages 138-147, ISBN: 978-3-540-72902-0. Alicante, Spain, June 2007

C. Hudelot and J. Atif and I. Bloch
An Ontology of Spatial Relations using Fuzzy Concrete Domains
AISB symposium on Spatial Reasoning and Communication, Newcastle, UK, apr 2007

J. Atif and C. Hudelot and O. Nempont and N. Richard and B. Batrancourt and E. Angelini and I. Bloch
GRAFIP: A Framework for the Representation of Healthy and Pathological Cerebral Information
ISBI 2007, pages 205-208, Washington DC, USA, Apr 2007

H. Khotanlou and J. Atif and E. Angelini and H. Duffau and I. Bloch
Adaptive Segmentation of Internal Brain Structures in Pathological MR Images Depending on Tumor Types
ISBI 2007, pages 588-591, Washington DC, USA, Apr 2007

J. Atif, C. Hudelot and I. Bloch
Adaptation de connaissances génériques pour l'interprétation d'images médicales : représentations par onologies et par graphes et modélisation floue
7e journées francophones Extraction et Gestion des Connaissances - Extraction de Connaissances et Images (EGC-ECOI'07), pqges 51-61, Namur, Belgique, jan 2007

J. Atif, C. Hudelot, G. Fouquier, I. Bloch, and E. Angelini.
From Generic Knowledge to Specific Reasoning for Medical Image Interpretation using Graph-based Representations.
In International Joint Conference on Artificial Intelligence IJCAI'07, Hyderabad, India, jan 2007

I. Bloch, C. Hudelot, and J. Atif.
On the Interest of Spatial Relations and Fuzzy Representations for Ontology-Based Image Interpretation.
In International Conference on Advances in Pattern Recognition, ICAPR'07, Kolkata, India, jan 2007. invited paper.

J. Atif, H. Khotanlou, E. Angelini, H. Duffau, and I. Bloch.
Segmentation of Internal Brain Structures in the Presence of a Tumor.
In MICCAI Workshop on Clinical Oncology, pages 61-68, Copenhagen, oct 2006.

J. Atif, O. Nempont, O. Colliot, E. Angelini, and I. Bloch.
Level Set Deformable Models Constrained by Fuzzy Spatial Relation.
In Information Processing and Management of Uncertainty in Knowledge-Based Systems, IPMU, pages 1534-1541, Paris, France, 2006.

B. Batrancourt, J. Atif, O. Nempont, E. Angelini, and I. Bloch.
Integrating Information from Pathological Brain MRI into an Anatomo-Functional Model.
In 24th IASTED International Multi-Conference on Biomedical Engineering, pages 236-241, Innsbruck, Austria, feb 2006.

B. Batrancourt, D. Hasboun, J. Atif, C. Hudelot, E. Angelini, and I. Bloch.
A Clustering View of the Human Brain Mapping Literature and an Anatomo-Functional Cerebral Model.
In Human Brain Mapping, Florence, Italy, jun 2006.

C. Hudelot, J. Atif, and I. Bloch.
Ontologie de relations spatiales floues pour l'interprétation d'images.
In Rencontres francophones sur la Logique Floue et ses Applications, LFA 2006, Toulouse, France, oct 2006.

C. Hudelot, J. Atif, O. Nempont, B. Batrancourt, E. Angelini, and I. Bloch.
GRAFIP : a Framework for the Representation of Healthy and Pathological Anatomical and Functional Cerebral Information.
In Human Brain Mapping, Florence, Italy, jun 2006.

H. Khotanlou, J. Atif, B. Batrancourt, O. Colliot, E. Angelini, and I. Bloch.
Segmentation de tumeurs cérébrales et intégration dans un modèle de l'anatomie.
In Reconnaissance des Formes et Intelligence Artificielle, RFIA'06, Tours, France, jan 2006.

J. Puentes, B. Batrancourt, L. Lecornu, J. Atif, A. Zemirline, G. Coatrieux, E. Angelini, I. Bloch, and C. Roux.
Enhancing Electronic Patient Record Functionality through Information Extraction from Images.
In IEEE International Conference on Information and Communication Technologies : From Theory To Applications ICTTA 2006, pages 978-983, Damascus, Syria, apr 2006.

H. Khotanlou, J. Atif, O. Colliot, and I. Bloch.
3D Brain Tumor Segmentation Using Fuzzy Classification and Deformable Models.
In WILF, volume LNAI 3849, pages 312-318, Crema, Italy, sep 2005.

A. Tarault, J. Atif, X. Ripoche, P. Bourdot, and A. Osorio.
Classification of radiological exams and organs by belief theory.
In the 3rd ACS/IEEE International Conference on Computer Systems and Applications, 2005.

O. Nempont, J. Atif, A. Herment, I. Bloch, and P. Carlier.
Graph-Based Segmentation of Muscles on NMR Images : Preliminary Results.
In 2005 Workshop on Investigation of Human Muscle Function, Nashville, TN, USA, 2005.

J. Atif, X. Ripoche, and A. Osorio.
Combined quadratic mutual information to a new adaptive kernel density estimator for non rigid image registration.
In SPIE Medical Imaging Conference, San Diego, California, USA, 2004.

X. Ripoche, J. Atif, and A. Osorio.
Three dimensional discrete deformable model guided by mutual information for medical image segmentation.
In SPIE Medical Imaging Conference, San Diego, California, USA, 2004.

J. Atif, A. Osorio, B. Devaux, and F.-X. Roux.
Integration of short-distance radiological images, angiography and multimodal image fusion in a stereotaxic software environment for biopsy intervention.
In CARS, page 1312, 2004.

A. Osorio, O. Traxer, S. Merran, X. Ripoche, and J. Atif.
Real time fusion of 2d fluoroscopic and 3d segmented ct images integrated into an augmented reality system for percutaneous nephrolithotomies (pcnl).
In InfoRAD 2004, Radiological Society of North America RSNA-04, Chicago, USA, 2004. Cette Communication a reçu le prix (Cum Laude).

A. Osorio, B. Devaux, R. Clodic, J. Atif, X. Ripoche, and F.-X. Roux.
A new augmented reality system for brain surgery improvements merging fluoroscopic 2d images, mr and ct 3d segmentations and talairach atlas.
In InfoRAD 2004, Radiological Society of North America RSNA-04, Chicago, USA, 2004.

A. Osorio, O. Traxer, J. Atif, X. Ripoche, M. Tligui, and B. Gattegno.
Percutaneous nephrolithotomies improvement using a new augmented reality system integrated into operating rooms.
In CARS, page 1322, 2004.

J. Atif, X. Ripoche, C. Coussinet, and A. Osorio.
Recalage élastique d'images médicales par maximisation de l'information mutuelle quadratique.
In GRETSI, Paris, France, 2003.

J. Atif, X. Ripoche, and A. Osorio.
Non-rigid medical image registration by maximisation of quadratic mutual information.
In IEEE 29th Annual Northeast Bioengineering Conference, Newark NJ, USA, march 2003.

A. Mihalcea, X. Ripoche, J. Atif, P. Valette, and A. Osorio.
A new pc based software for semi automatic liver segmentation. clinical study for preoperative tumor localization.
In InfoRAD 2003, Radiological Society of North America RSNA-03, Chicago, USA, 2003.

A. Osorio, O. Traxer, S. Merran, X. Ripoche, and J. Atif.
3d reconstruction and instant volume measurement of complex renal calculi : application to percutaneous nephrolithotomy.
In InfoRAD 2003, Radiological Society of North America RSNA-03, Chicago, USA, 2003. Cette Communication a reçu le prix (Certificate of merit).

O. Traxer, A. Osorio, S. Merran, J. Atif, X. Ripoche, and M. Tligui.
An augmented reality system for percutaneous nephrolithotomy.
In InfoRAD 2003, Radiological Society of North America RSNA-02, Chicago, USA, 2003. Cette Communication a reçu le prix (Certificate of merit).

V. Servois, A. Osorio, J. Atif, et al.
A new pc based software for prostatic 3d segmentation and volume measurement. application to permanent prostate brachytherapy (ppb) evaluation using ct and mr images fusion.
In InfoRAD 2002, Radiological Society of North America RSNA-02, Chicago, USA, 2002.

A. Osorio, V. Servois, J. Atif, X. Ripoche, J.C. Rosenwald, Ph. Giraud, L. Ollivier, S. Neuensch-wander.
A new computerized system for automatically calibrate a radiotherapy unit using 3D images segmented from CT and MR sources .
In InfoRAD-RSNA'02, Radiological Society of North America, Chicago, USA, November 30- Dencember 6, 2002.

A. Osorio, P.J. Valette, A. Mihalcea, J. Atif, X. Ripoche.
A new PC based software to perform semi-automatic hepatic segmentation using CT and MR images.
in InfoRAD-RSNA'02, Radiological Society of North America, Chicago, USA, November 30- December 6, 2002.

A. Osorio, V. Servois, S. Merran, L. Ollivier, J. Atif, C. Boursier, S. Neuenschwander.
Follow up of 15 patients under chemotherapy for liver metastasis using a new PC based 3D reconstruction algorithm .
in InfoRAD-RSNA'01, Radiological Society of North America , Chicago, USA, 24-30 November 2001.

A. Osorio, S Merran, A Tarault, J Atif, X Ripoche.
Pré-traitement et classification automatique d'images radiologiques .
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2003.

O Traxer, S Merran, A Osorio, J Atif, X Ripoche, Ph Thibault.
Intérêts de la segmentation 3D d'images radiologiques des calculs complexes du rein pour la planification de la stratégie thérapeutique.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2003.

A Osorio, O Traxer, S Merran, J Atif, X Ripoche, M Tligui, Ph Thibault.
Utilisation de la réalité augmentée pour la planification chirurgicale de néphrolithotomie percutanée.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2003. (Cette communication a reçu le prix SIEMENS JFR-I4).

V. Servois, A. Osorio, J. Atif, C. El Khoury et al.
Mesure 3D du volume prostatique à l'aide d'un nouveau logiciel sur PC : application à l'évaluation de la curiethérapie prostatique sur des images recalées TDM-IRM.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2002.

J. Valette, A. Osorio, A. Mihalcea, J. Atif, X. Ripoche.
Une nouvelle méthode de segmentation hépatique semi-automatique à partir d'images TDM.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2002.

V. Servois, A.Osorio, S. Merran, L. Ollivier, J. Atif, S. Neuenschwander.
Reconstruction 3D et mesure du volume de métastases hépatiques. Application au suivi de 15 patients sous chimiothérapie.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2002.

A. Osorio, J. Atif, X. Ripoche, B. Devaux.
Un logiciel de stéréotaxie intégrant des données multimodales 3D et des images radiographiques à courte distance.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2002

A. Osorio, V. Servois, J. Atif, X. Ripoche, L. Ollivier, J.C. Rosenwald, Ph. Giraud, S. Neuen-schwander.
Un nouveau système informatique de couplage automatique entre imagerie 3D et radiothérapie.
in Journées françaises de Radiologie (JFR-SFR), Paris, Octobre 2002.

Retour | Back
Berbiqui